Tools for glycomics using mass spectrometry data of glycan chains and glycopeptides.
It automatically reads MS/MS and MSn data obtained from major manufacturers' mass spectrometers to predict glycan structures. Furthermore, it comprehensively supports glycopeptide analysis using LC-MS/MS data. SimGlycan matches the experimentally obtained MS/MS data with its proprietary database and ultimately generates a ranked list of candidate structures.
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basic information
[Support Platform] Windows: Vista/Windows 7/Windows 8/Windows 10 [Recommended System Requirements] CPU: Intel Core i5 / i7 RAM: 12GB or more HDD Free Space: 500GB or more Screen Resolution: 1024 x 768 or more
Price information
Prices vary depending on whether it's commercial or academic, as well as the lineup, so please feel free to contact us.
Delivery Time
P3
Applications/Examples of results
[Features] - Robust database for glycan and glycopeptide information - Support for MALDI MS/MS and LC-MS/MS workflows - Compatibility with data input file formats from major manufacturers - Accurate ranking mechanism - Filters for obtaining precise results - Comprehensive result analysis - LC-MS and LC-MS/MS data processing - High-throughput analysis - Customizable database available as "SimGlycan Enterprise Edition" [Examples of Adoption] Widely adopted by pharmaceutical companies and research organizations developing and researching biopharmaceuticals such as antibody drugs and blood products. [Cited Papers] http://www.premierbiosoft.com/citations/glycomics-posters-technical-application-notes.html
Detailed information
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An interface showing the identified glycan structures of LC-detected compounds. It clearly displays the identified glycan structures in a ranked format using a unique database search algorithm.
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Example of a spectrum plot (showing inter-peak fragment loss) You can perform fragment annotation of glycan and glycopeptide in MS/MS spectra. It can be output in an easy-to-read format, such as symbol display, Domon-Costello name display, and inter-peak fragment loss display.
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Glycan structure drawing function You can draw and edit the structures of glycans and glycopeptides. By comparing the drawn glycan structures with experimental data, it helps in elucidating unknown structures.
Line up（2）
| Model number | overview |
|---|---|
| SimGlycan | The master database curated by PREMIER Biosoft is built into one program. |
| SimGlycan Enterprise Edition | If you are using a private custom database within your organization or using your own data, SimGlycan Enterprise Edition can be used as a secure tool for resolving new glycans and glycopeptides. You can also customize the database to create sub-databases that narrow the search scope. |
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Company information
Our company was established in 2005 and is engaged in the sale of software and databases related to biotechnology and chemicals, the construction and consulting of drug discovery informatics systems, and consulting and data contract analysis for bio-related businesses. Our mission is to provide researchers involved in bio-related studies at universities and public research institutions, as well as those engaged in new drug development at pharmaceutical companies and medical professionals working in hospitals, with useful information, technology, and services at the optimal timing they require for their research.