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[Case Study] Method Transfer for HPLC Purification and Analysis of Oligonucleotides

Streamlining the process from high-purity fractionation of double-labeled oligos to quality confirmation using HRAM-MS.

This application note presents a case study of transferring the purification and analysis workflow of synthetic oligonucleotides from a competitor's HPLC system to the Thermo Scientific Vanquish HPLC system. Focusing on dual-labeled oligonucleotide samples, the workflow was validated through purification via semi-preparative RP-HPLC, purity assessment using HPLC-UV, and identity confirmation with HRAM-MS. A comparison using the Hypersil GOLD column demonstrated the ability to isolate the target oligonucleotides with high purity, achieving efficient quality control. The note provides practical comparative data on retention behavior, peak shape, and collection capacity differences during method transfer. **Features** - Case study on the transfer from a competitor's LC purification system to the Vanquish analytical purification LC system. - Validation of purification, purity assessment, and identity confirmation of dual-labeled oligonucleotides as a complete workflow. - Comparison of separation performance between the Hypersil GOLD column and competitor columns. - Explanation of differences in peak shape and collection capacity with specific chromatograms. - Introduction of an efficient quality control method combining HPLC-UV and HRAM-MS.

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Recycling Fractionation HPLC LaboACE

This is a preparative HPLC aimed at the isolation and purification of target compounds.

The highly acclaimed LaboACE series has further evolved, with significantly improved recovery rates and purity. With a combination of comprehensive automatic functions and high-speed preparative GPC columns, you can rely on us for large-scale preparative needs! You can program up to 30 tasks (events) for a single chromatogram, including sample injection, cutting unnecessary peaks, recycling, and fractionation, and repeat the entire sequence up to 99 times. Additionally, the built-in fraction collector in the main unit can accommodate various container sizes, making it ideal for large-scale fractionation of the same sample. 【Features】 - Compact body equipped with comprehensive automatic functions - Standard recycling function that promotes separation by repeatedly passing through the column (no solvent is consumed during recycling). - Automatic cleaning function for automatic flow path cleaning - Easy operation with a large LCD touch panel - PC control function (optional) to operate the main unit via the included PC - Low-pressure two-liquid gradient capability is also available (optional) *Manual models are also available in the lineup. For more details, please feel free to contact us.

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A universal UHPLC composed of biocompatible materials.

It can be used for analysis under high salt concentration and high pH conditions. It is biocompatible and ensures the integrity of biomolecules and the robustness of the system.

It is biocompatible and ensures the integrity of biomolecules and the robustness of the system. Based on the proven 1290 Infinity II LC technology, method transfer can be easily implemented. Transferring from conventional equipment is also straightforward, saving time and effort in training. It exhibits very high separation and resolution capabilities at pressures of up to 130 MPa, minimizing dispersion. Various bio flow cells are available, enabling high-sensitivity UV detection. It is also optimal as an MS front.

  • Analytical Equipment and Devices
  • HPLC

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