Introducing new features of 'CodonCode Aligner' for DNA sequence assembly and alignment.
This is a program for Windows and macOS that helps with DNA barcoding, sequence assembly and contig editing, and mutation detection. Version 13.0 has newly added features such as clone verification, mutation detection for NGS data, cloning history verification, and a new cloning method called virtual HiFi DNA Assembly. □Product Page□ (To the IPROS manufacturing page) https://mono.ipros.com/product/detail/2001539474/ (To the Hulinks page) https://www.hulinks.co.jp/software/codoncode-aligner/
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basic information
New Features in Version 13 ------------------------------------------- ■Clone Validation Quickly group reads by clone, compare them with references, and verify if the sequences match the expected clones. A report will be generated that includes direct links to all mismatched positions on the alignment. ■Mutation Detection in NGS Data A new feature has been added to generate mutation reports for text sequence files. Trace files are no longer required for mutation analysis, enabling mutation detection in NGS projects. ■Cloning History Feature The history of the creation process for all cloning constructs made with the Aligner is now recorded. ■HiFi DNA Assembly A virtual cloning feature for HiFi DNA assembly has been introduced. □For more details□ (Visit the HuLinks page) https://www.hulinks.co.jp/software/codoncode-aligner/codoncode-aligner-versions/
Price information
□Price information and quotation requests here□ Prices and delivery times vary depending on the number of licenses and the format. (Go to the Hulinks page) https://www.hulinks.co.jp/software/codoncode-aligner/#price □Trial□ Demo version application form (Go to the Hulinks page) https://www.hulinks.co.jp/contact/demo-request/
Price range
P3
Delivery Time
P3
※The price and delivery time vary depending on the number of licenses and the type.
Applications/Examples of results
- Examples of papers using CodonCode Aligner in the analysis process of the novel coronavirus - Identifying the age of rock art through microbial sequencing - Barcode identification of insect species in Pakistan - Conservation genetics research on the giant water bug - Classification and conservation of landbirds in the Aldabra Atoll - Evolution and speciation of the European corn borer (ECB) - Repetitive elements in electric knife fish ------------------------------------------------------------------------- □ Case studies are available □ (Visit the Hulinks page) https://www.hulinks.co.jp/software/codoncode-aligner/#case
Detailed information
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■Clone Verification You can quickly group reads by clone, compare them with the reference, and check whether the sequence matches the expected clone.
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■Mutation Detection of NGS Data A new feature has been added to generate mutation reports for text sequence files. Trace files are no longer required for mutation analysis, enabling mutation detection in NGS projects.
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■Cloning History Function A complete history of the creation process is now recorded for all cloning constructs created with the Aligner.
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■HiFi DNA Assembly In addition to existing restriction enzyme cloning, Gibson assembly, TA cloning, directional TOPO cloning, blunt-end PCR, and TOPO cloning, a virtual cloning feature for HiFi DNA assembly has been introduced.
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![[Clone Verification] Group leads by clone, compare with reference, and verify whether the sequence matches the expected clone.](https://image.mono.ipros.com/public/news/image/1/396065/IPROS18320737271492644306.png?w=280&h=280)
Company information
Even in a rapidly changing world, the philosophy of HuLinks has not changed since its founding. The greatness of humanity lies in our ability to think, create, and carve out a new tomorrow. We aim to contribute to society by providing carefully selected solutions that support this remarkable human ability—intellectual creation—while also offering a more comfortable environment and enhancing productivity.
